BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007F09SP1|AL425738
(821 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1573 1617 0.0
>3x_Contig1573
Length = 10819
Score = 1617 bits (815), Expect = 0.0
Identities = 819/821 (99%)
Strand = Plus / Minus
Query: 1 aagtacaggttgaagcacaggatcctaatgtgaagacgttcgtctcttctaatggatcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9588 aagtacaggttgaagcacaggatcctaatgtgaagacgttcgtctcttctaatggatcag 9529
Query: 61 tgattccattgagaaagaaaaggaaggacccagcacaaattgataccagttggtccgctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9528 tgattccattgagaaagaaaaggaaggacccagcacaaattgataccagttggtccgctg 9469
Query: 121 atgaagcgtatggaataaatatcaatgcgttactggataggatagagaatgatgttggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9468 atgaagcgtatggaataaatatcaatgcgttactggataggatagagaatgatgttggag 9409
Query: 181 actcgactccgactaacaatttacaacctcagaaggatatagacaaggacaaggacaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9408 actcgactccgactaacaatttacaacctcagaaggatatagacaaggacaaggacaaga 9349
Query: 241 agagattatcgtctggaaacactttatggactgagaaatggagaccacacaagtttctgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9348 agagattatcgtctggaaacactttatggactgagaaatggagaccacacaagtttctgg 9289
Query: 301 atcttgtgggtaacgaacgtctcaatcgtagagttcttttctggttaaggcaatggtcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9288 atcttgtgggtaacgaacgtctcaatcgtagagttcttttctggttaaggcaatggtcac 9229
Query: 361 cgttggtgtttgatgaagaattgcctgaattaacgacgtttaagaaacacagtaacccag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9228 cgttggtgtttgatgaagaattgcctgaattaacgacgtttaagaaacacagtaacccag 9169
Query: 421 aaaatgatgcaagcgatgagtatgcggaccctttaaaaagaccaatgaaacgaattcttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9168 aaaatgatgcaagcgatgagtatgcggaccctttaaaaagaccaatgaaacgaattcttc 9109
Query: 481 tgattcatggaccccccggaatagggaagactagtgtagcccatgttgttgctaaacaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9108 tgattcatggaccccccggaatagggaagactagtgtagcccatgttgttgctaaacaag 9049
Query: 541 cgggttattcggtgatggagattaatgcaagtkatgaaagagctggcgatagagttagac 600
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 9048 cgggttattcggtgatggagattaatgcaagtgatgaaagagctggcgatagagtcagac 8989
Query: 601 acaaggttcaaaacgcattgtttaaccatactttcaatgacaaaccagtctgtcttattg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8988 acaaggttcaaaacgcattgtttaaccatactttcaatgacaaaccagtctgtcttattg 8929
Query: 661 cagatgaaattgatgggagtgtggaaaacggattcataaaagttttgttagatatcatca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8928 cagatgaaattgatgggagtgtggaaaacggattcataaaagttttgttagatatcatca 8869
Query: 721 aatctgactcgaaggccacccatgatcttattactggccgtacggggaaagatcatcatt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8868 aatctgactcgaaggccacccatgatcttattactggccgtacggggaaagatcatcatt 8809
Query: 781 tcaaatcatctgccagattacaaaagaagaagaaaaacaag 821
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 8808 tcaaatcatctgccagattacaaaagaagaagaaaaacaag 8768
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7257
Number of Sequences: 1807
Number of extensions: 7257
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 821
length of database: 10,358,551
effective HSP length: 16
effective length of query: 805
effective length of database: 10,329,639
effective search space: 8315359395
effective search space used: 8315359395
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)